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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cacna2d1'

Total of fusion sequences: 29 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Mus musculus

NM_023865.3
20..746
99.9%
+
4

XM_011249744.2
747..779
100.0%
-
5
1
0
0
exon-intron
22
Mus musculus

XM_006515822.3
38..787
95.8%
-
12

XM_011249744.2
83..830
95.4%
-
5
1
0
0
intron-intron
23
Mus musculus

XR_374468.3
40..387
98.0%
-
2

XM_011249744.2
381..408
100.0%
-
5
1
0
0
exon-intron
24
Mus musculus

NM_011633.2
49..515
98.1%
-
1

XM_011249744.2
494..522
100.0%
-
5
1
0
0
intron-intron
25
Mus musculus

NM_001291078.1
19..494
99.8%
-
19

XM_011249744.2
493..521
100.0%
-
5
1
0
0
exon-intron
26
Mus musculus

XM_006497121.3
3..255
99.3%
-
1

XM_011249744.2
239..272
100.0%
-
5
1
0
0
intron-intron
27
Mus musculus

NM_027947.2
16..597
99.9%
-
2

XM_011249744.2
592..620
100.0%
-
5
1
0
0
exon-intron
28
Mus musculus

XM_006505708.3
22..329
99.7%
+
6

XM_011249744.2
322..351
100.0%
-
5
1
0
0
exon-intron
29
Mus musculus

NM_011321.3
21..464
99.1%
+
17

XM_011249744.2
465..493
100.0%
-
5
1
0
0
exon-intron

T o p