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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Cacna2d1'

Total of fusion sequences: 29 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Mus musculus

NM_173866.3
56..529
99.6%
+
8

XM_011249744.2
530..558
100.0%
-
5
1
0
0
exon-intron
12
Mus musculus

NM_001302213.1
45..505
99.6%
-
16

XM_011249744.2
504..531
100.0%
-
5
1
0
0
exon-intron
13
Mus musculus
Gm38438
XR_001782857.1
4..128
99.2%
+
X

XM_011249744.2
118..154
100.0%
-
5
1
0
0
intron-intron
14
Mus musculus

NM_001159518.1
42..419
100.0%
-
5

XM_011249744.2
419..447
100.0%
-
5
1
0
0
exon-intron
15
Mus musculus
Gm10123 46..773
99.1%
+
9

XM_011249744.2
773..803
100.0%
-
5
1
0
0
exon-intron
16
Mus musculus

NM_177389.3
18..518
99.6%
-
1

XM_011249744.2
499..527
100.0%
-
5
1
0
0
exon-intron
17
Mus musculus

NM_008847.3
10..333
99.7%
-
3

XM_011249744.2
323..352
100.0%
-
5
1
0
0
exon-intron
18
Mus musculus
Gm2000 37..415
99.1%
+
1

XM_011249744.2
414..442
100.0%
-
5
1
0
0
exon-intron
19
Mus musculus
Rps10-ps2 1..577
99.2%
-
16

XM_011249744.2
557..587
100.0%
-
5
1
0
0
exon-intron
20
Mus musculus
Vdac3-ps1 19..487
99.2%
-
13

XM_011249744.2
470..497
100.0%
-
5
1
0
0
exon-intron

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