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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CXXC1'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001286264.1
1..156
100.0%
+
6

XM_011525940.2
149..211
100.0%
-
18
1
0
0
exon-exon
2
Homo Sapiens
LINC00603 5..48
100.0%
-
5

XM_017025718.2
45..225
98.9%
+
18
1
0
0
intron-exon
3
Homo Sapiens

XM_011525940.2
13..310
100.0%
-
18

XM_024447323.1
311..341
100.0%
-
8
1
0
0
exon-intron
4
Homo Sapiens

XM_017025718.2
1..810
99.1%
-
18
LOC102724843
XM_024452040.1
808..827
100.0%
+
21
1
0
0
exon-intron

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