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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CTSA'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NR_133656.1
1..453
99.2%
+
20

NM_004204.3
448..695
98.8%
+
16
2
136
0
exon-exon
2
Homo Sapiens
ChimerDB
NR_133656.1
1..454
99.8%
+
20

NM_004204.3
449..559
100.0%
+
16
2
136
0
exon-exon
3
Homo Sapiens

NM_006227.3
1..147
98.7%
-
20

NM_001127695.2
148..516
98.7%
-
20
3
358
358
exon-exon
4
Homo Sapiens

NR_133656.1
1..268
98.6%
+
20

NM_006227.3
269..492
98.6%
+
20
3
36
433
intron-exon
5
Homo Sapiens

NR_133656.1
1..304
100.0%
+
20

NM_006227.3
305..493
100.0%
+
20
3
36
433
intron-exon
6
Homo Sapiens

XR_001740038.2
8..104
95.7%
-
3

NM_001127695.2
95..122
95.4%
-
20
1
0
0
intron-intron
7
Homo Sapiens

NM_000852.3
3..203
97.5%
-
11

NR_133656.1
192..251
100.0%
-
20
1
0
0
exon-exon
8
Homo Sapiens

NR_133656.1
1..189
99.5%
-
20

XM_005250393.1
182..349
99.5%
+
7
1
0
0
exon-exon
9
Homo Sapiens

XM_017007299.1
74..93
100.0%
-
3

NR_133656.1
87..531
98.5%
+
20
1
0
0
intron-exon

T o p