Result for the search of Gene Name/NCBI ID(s): 'CTBP1'

Total of fusion sequences: 13 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DB495584 ANNOTATION OF CHIMERA FUSION GenBank ID: DB495584 FASTA Head Gene (1) Alignment: FZD3 | OMIM: 606143 Tail Gene (2) Alignment: CTBP1 | OMIM: 602618 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7976 8 + 28494214 28494343 1 1 protein-coding 1487 4 - 1228321 1241521 4 1 protein-coding 505 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to 2-Hacid_dh_C (PF02826, IPR006140) 178 231 415 8.2e-60 187.300 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Cellsynth_D (PF03500, IPR022798) 144 412 475 1.6e-05 11.000 Cellulose synthase subunit D Updated: 2019-02-23 Owner: ChiTaRS	FZD3 E5RGI9 Q9NPG1 XR_949476.2	1..132 97.0%	+ 8	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	131..505 100.0%	- 4	1 0 0	exon-exon
2 Homo Sapiens	SplGraphs AW890211 ANNOTATION OF CHIMERA FUSION GenBank ID: AW890211 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: CTBP1 | OMIM: 602618 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 - 1242753 1243043 10 1 protein-coding 1487 4 - 1242979 1243153 1 1 protein-coding 478 hg38 Updated: 2019-02-21 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	18..309 97.3%	- 4	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	304..478 98.9%	- 4	0 1627 806	exon-exon	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AW890211 CTBP1 4 1243038 1243043 1246212 3169 CTBP1 4 1242979 1242984 1236212 6767 NHEK/SV3 (CVCL_9Q50) 25497547 AW890211 CTBP1 4 1243038 1243043 1246212 3169 CTBP1 4 1242979 1242984 1246212 3228 HSPC, NHEK/SV3 (CVCL_9Q50) 25497547
3 Homo Sapiens	AA506318 ANNOTATION OF CHIMERA FUSION GenBank ID: AA506318 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: CTBP1 | OMIM: 602618 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 + 1241947 1242163 10 1 protein-coding 1487 4 + 1241468 1241526 2 1 protein-coding 285 hg38 Updated: 2019-02-20 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	7..222 99.6%	+ 4	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	220..278 100.0%	+ 4	0 1627 806	exon-exon	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AA506318 CTBP1 4 1242161 1242163 1246212 4049 CTBP1 4 1241468 1241470 1236212 5256 NHEK/SV3 (CVCL_9Q50) 25497547 AA506318 CTBP1 4 1242161 1242163 1246212 4049 CTBP1 4 1241468 1241470 1246212 4742 HSPC, NHEK/SV3 (CVCL_9Q50) 25497547
4 Mus musculus	AK165276 ANNOTATION OF CHIMERA FUSION GenBank ID: AK165276 FASTA UniProtKB: O88712 C-terminal-binding protein 1 (CtBP1) (EC 1.1.1.-) Fusion Gene(s): Ctbp1 Head Gene (1) Alignment: Ctbp1 Tail Gene (2) Alignment: Tcf3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 13016 5 - 33248419 33274958 10 1 protein-coding 21423 10 + 80417347 80417419 1 1 protein-coding 1811 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Ctbp1 A0A0J9YTW3 A0A0J9YU62 A0A0J9YU66 A0A0J9YUM4 A0A0J9YUR5 A0A0J9YVC3 A0A0J9YVI3 O88712 NM_001198861.1	2..1741 99.9%	- 5	Tcf3 A0A0R4J011 A0A0R4J014 D3Z037 E9PVV1 E9PVV2 E9PWE2 E9PWE3 E9PWE4 E9PWE5 F6T941 P15806 Q9CRT1 XR_001779500.1	1739..1811 100.0%	+ 10	1 0 0	exon-exon
5 Mus musculus	CD768161 ANNOTATION OF CHIMERA FUSION GenBank ID: CD768161 FASTA Head Gene (1) Alignment: Ctbp1 Tail Gene (2) Alignment: Stx3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 13016 5 + 33247893 33248329 1 1 protein-coding 20908 19 + 11776355 11776478 1 1 protein-coding 627 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Ctbp1 A0A0J9YTW3 A0A0J9YU62 A0A0J9YU66 A0A0J9YUM4 A0A0J9YUR5 A0A0J9YVC3 A0A0J9YVI3 O88712 NM_001198861.1	45..481 99.8%	+ 5	Stx3 A0A1B0GRC2 A0A1C7CYU4 Q3UZI9 Q64704 Q8CAN1 NM_001286543.1	476..599 97.6%	+ 19	1 0 0	exon-exon
6 Homo Sapiens	AA670313 ANNOTATION OF CHIMERA FUSION GenBank ID: AA670313 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: MANEAL Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 - 1211663 1211877 1 1 protein-coding 149175 1 + 37800344 37800418 1 1 protein-coding 285 hg38 Updated: 2019-01-29 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	1..215 100.0%	- 4	MANEAL E9PMU5 H0YCZ3 Q5VSG8 NM_001031740.2	211..285 98.7%	+ 1	1 0 0	exon-exon
7 Homo Sapiens	AV694812 ANNOTATION OF CHIMERA FUSION GenBank ID: AV694812 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: ADARB2 | OMIM: 602065 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 - 1211447 1211913 1 1 protein-coding 105 10 + 1565796 1566113 1 0 oncogene, protein-coding 612 hg38 Updated: 2019-02-07 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_005272263.5	1..467 99.8%	- 4	ADARB2 A4VCH5 Q5VW43 Q86X17 Q9NS39 NM_018702.3	455..515 98.4%	+ 10	1 0 0	exon-intron
8 Homo Sapiens	N67304 ANNOTATION OF CHIMERA FUSION GenBank ID: N67304 FASTA Head Gene (1) Alignment: PLCL2 | OMIM: 614276 Tail Gene (2) Alignment: CTBP1 | OMIM: 602618 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23228 3 - 16840731 16873931 NA 0 protein-coding 1487 4 + 1211448 1211672 3 NA protein-coding 224 hg38 Updated: 2018-11-18 Owner: ChiTaRS	PLCL2 H7C276 Q9UPR0	1..32 100.0%	- 3	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9	2..224 98.7%	+ 4	1 0 0	intron-exon
9 Mus musculus	AK215609 ANNOTATION OF CHIMERA FUSION GenBank ID: AK215609 FASTA Head Gene (1) Alignment: Ctbp1 Tail Gene (2) Alignment: Nop2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 13016 5 - 33259168 33261135 2 1 protein-coding 110109 6 - 125137668 125139671 2 1 387 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Ctbp1 A0A0J9YTW3 A0A0J9YU62 A0A0J9YU66 A0A0J9YUM4 A0A0J9YUR5 A0A0J9YVC3 A0A0J9YVI3 O88712 NM_001198861.1	1..304 99.4%	- 5	Nop2 A0A0N4SW16 E9QN31 Q922K7 Q99KC3 NM_138747.2	299..387 100.0%	- 6	1 0 0	exon-exon
10 Homo Sapiens	EC526677 ANNOTATION OF CHIMERA FUSION GenBank ID: EC526677 FASTA Head Gene (1) Alignment: CTBP1 | OMIM: 602618 Tail Gene (2) Alignment: NF2 | OMIM: 607379 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1487 4 - 1220116 1220197 0 0 protein-coding 4771 22 - 29666885 29666951 0 0 oncogene, tumor suppressor, protein-coding 88 hg38 Updated: 2019-04-05 Owner: ChiTaRS	CTBP1 A0A0D9SGE6 D6RAX2 E7EPF8 E7ESU7 E7EUB3 E9PGB1 H0Y8U5 H0Y8W7 H0Y913 H0Y9M9 Q13363 Q4KMQ8 Q6IP95 X5D315 X5D7T7 X5D8Y5 X5DRG9 XM_017007767.2	6..84 98.8%	- 4	NF2 A0A024R1D9 A0A024R1F6 A0A024R1I0 A0A024R1J8 A0A024R1J9 A0A286SD19 A0A286SD20 A0A286SD34 A5A158 P35240 Q16230 Q16231 Q16232 Q16233 Q16276 Q7KZ66 Q9NRW8 NM_016418.5	24..88 95.4%	- 22	1 0 0	intron-intron

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