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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'COL6A3'

Total of fusion sequences: 22 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XM_011510574.1
1..335
100.0%
-
2

XM_005274322.3
332..561
100.0%
-
11
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_001145725.1
10..480
99.8%
+
4

XM_017003304.1
475..680
98.6%
+
2
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_052854.3
2..364
99.5%
-
11

XM_017003304.1
360..646
100.0%
+
2
1
0
0
exon-exon
Homo Sapiens ChimerDB
XM_005266890.4
4..280
100.0%
+
6

XM_017003304.1
274..366
99.0%
+
2
1
0
0
exon-exon
Homo Sapiens ChimerDB
XM_017003304.1
18..100
100.0%
+
2

NM_001008530.2
97..368
98.6%
+
14
1
0
0
exon-exon
Homo SapiensSplGraphs
XM_017003304.1
3..129
97.6%
-
2

NM_198236.2
123..210
96.6%
-
1
1
0
0
exon-exon
Homo Sapiens TRNS1 20..343
100.0%
-
MT

XM_017003304.1
339..694
99.5%
+
2
1
0
0
intron-exon
Homo Sapiens
XM_017003304.1
20..152
100.0%
+
2

XM_017003813.2
148..296
99.4%
+
2
1
0
0
exon-intron
Homo Sapiens
NM_001184785.1
33..178
100.0%
-
10

XM_017003304.1
171..303
100.0%
+
2
1
0
0
intron-exon
Homo Sapiens 22..318
99.0%
-
7
301..320
100.0%
+
2
1
0
0
intron-intron

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