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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'COL5A2'

Total of fusion sequences: 24 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_005249785.2
9..163
100.0%
+
7

XM_011510573.3
164..510
100.0%
+
2
1
0
0
exon-exon
2
Homo Sapiens

NM_000393.4
1..4056
99.9%
-
2
LOC105379720
XR_002956541.1
4043..4077
100.0%
+
7
1
0
0
exon-intron
3
Mus musculus

NM_007737.2
1..2956
99.7%
-
1

NM_025558.5
2952..2977
100.0%
-
8
1
0
0
exon-intron
4
Mus musculus

NM_007737.2
1..385
100.0%
+
1

NM_001289587.1
375..432
100.0%
-
15
2
0
256
exon-exon
5
Mus musculus

NM_001289587.1
1..73
100.0%
+
15

NM_007737.2
63..415
100.0%
-
1
2
0
256
exon-exon
6
Homo Sapiens

XM_011510573.3
8..82
100.0%
+
2

XM_011510573.3
71..434
99.8%
-
2
1
0
0
exon-exon
7
Homo Sapiens

NM_022373.4
13..36
100.0%
-
7

NM_000393.4
22..135
99.2%
-
2
1
0
0
exon-exon
8
Mus musculus

NM_007737.2
58..567
99.9%
-
1

XM_011241865.1
567..594
100.0%
-
7
1
0
0
exon-intron
9
Mus musculus

NM_007737.2
1..321
99.7%
-
1

XM_006502046.2
315..383
100.0%
-
3
1
0
0
exon-exon
10
Homo Sapiens
LINC01090
ENST00000632331
1..119
100.0%
-
2

NM_000393.4
120..614
98.0%
+
2
1
0
0
intron-intron

T o p