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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'COL5A2'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_007737.2
1..2956
99.7%
-
1

NM_025558.5
2952..2977
100.0%
-
8
1
0
0
exon-intron
2
Mus musculus

NM_007737.2
1..385
100.0%
+
1

NM_001289587.1
375..432
100.0%
-
15
2
0
256
exon-exon
3
Mus musculus

NM_001289587.1
1..73
100.0%
+
15

NM_007737.2
63..415
100.0%
-
1
2
0
256
exon-exon
4
Mus musculus

NM_007737.2
58..567
99.9%
-
1

XM_011241865.1
567..594
100.0%
-
7
1
0
0
exon-intron
5
Mus musculus

NM_007737.2
1..321
99.7%
-
1

XM_006502046.2
315..383
100.0%
-
3
1
0
0
exon-exon
6
Mus musculus

NM_007737.2
52..434
98.5%
-
1

NM_178641.5
247..455
96.7%
-
7
1
0
0
intron-intron
7
Mus musculus

NM_007737.2
52..367
99.4%
-
1

NM_008167.2
356..387
96.8%
-
6
1
0
0
intron-intron
8
Mus musculus
Acsbg2
Q2XU92

NM_001039114.1
1..25
100.0%
+
17

NM_007737.2
21..568
98.8%
+
1
1
0
0
intron-exon
9
Mus musculus

NM_007737.2
8..140
99.3%
-
1
6330411D24Rik 135..237
95.1%
+
4
1
0
0
exon-intron
10
Mus musculus

NM_007737.2
1..349
97.7%
-
1

XM_011246728.1
347..375
100.0%
+
17
1
0
0
exon-intron

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