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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'COL5A2'

Total of fusion sequences: 22 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_005249785.2
9..163
100.0%
+
7

XM_011510573.3
164..510
100.0%
+
2
1
0
0
exon-exon
Homo Sapiens
XM_011510573.3
8..82
100.0%
+
2

XM_011510573.3
71..434
99.8%
-
2
1
0
0
exon-exon
Homo Sapiens
NM_022373.4
13..36
100.0%
-
7

NM_000393.4
22..135
99.2%
-
2
1
0
0
exon-exon
Mus musculus
NM_007737.2
58..567
99.9%
-
1

XM_011241865.1
567..594
100.0%
-
7
1
0
0
exon-intron
Mus musculus
NM_007737.2
1..321
99.7%
-
1

XM_006502046.2
315..383
100.0%
-
3
1
0
0
exon-exon
Homo Sapiens
NM_000393.4
1..4056
99.9%
-
2
LOC105379720
XR_002956541.1
4043..4077
100.0%
+
7
1
0
0
exon-intron
Mus musculus
NM_007737.2
1..2956
99.7%
-
1

NM_025558.5
2952..2977
100.0%
-
8
1
0
0
exon-intron
Mus musculus
NM_007737.2
52..434
98.5%
-
1

NM_178641.5
247..455
96.7%
-
7
1
0
0
intron-intron
Homo Sapiens
XM_011510573.3
8..476
100.0%
-
2
SLMO2-ATP5E
NR_037929.1
477..497
100.0%
+
20
1
0
0
exon-intron
Homo Sapiens LOC105372288
NR_134908.1
1..25
100.0%
-
19

NM_000393.4
19..487
99.8%
+
2
1
0
0
intron-exon

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