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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'COL4A6'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
Svep1
A2AVA0

NM_022814.2
1..2364
100.0%
-
4

NM_053185.2
1793..2375
97.6%
+
X
1
0
0
exon-intron
2
Homo Sapiens

NM_001287758.1
1..1873
99.9%
-
X

XM_017016573.2
1862..1888
100.0%
-
10
1
0
0
exon-intron
3
Homo Sapiens

NM_001287758.1
1..23
100.0%
+
X

NR_110279.2
23..471
96.9%
+
19
1
0
0
intron-exon
4
Mus musculus

NM_053185.2
1..363
98.7%
-
X

ENSMUST00000093775
44..387
97.7%
-
9
1
0
0
exon-intron
5
Homo Sapiens

XM_006724617.3
26..142
99.2%
-
X

XM_017006576.2
138..299
100.0%
+
3
1
0
0
intron-exon
6
Homo Sapiens
45..64
100.0%
-
X
51..130
100.0%
+
X
1
0
0
intron-intron
7
Homo Sapiens

NM_001287758.1
1..24
100.0%
+
X

NM_001003793.2
7..216
100.0%
-
3
1
0
0
intron-intron
8
Homo Sapiens

XM_017000487.1
1..27
100.0%
+
1

NM_001287758.1
22..46
100.0%
+
X
1
0
0
intron-intron

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