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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'COL1A2'

Total of fusion sequences: 131 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_000089.3
1..160
100.0%
+
7

XM_017013576.1
161..541
100.0%
-
8
1
0
0
exon-exonBREAKPOINTs
10987300
2
Homo Sapiens
SplGraphs
NM_000089.3
1..224
100.0%
+
7

XM_005266338.2
217..456
100.0%
-
13
2
0
1
exon-exon
3
Homo Sapiens
SplGraphs
NR_103802.1
1..85
100.0%
-
13

NM_000089.3
82..540
100.0%
+
7
1
0
0
exon-exon
4
Homo Sapiens
SplGraphs
NM_000089.3
1..462
99.8%
+
7

NM_033375.4
463..583
100.0%
-
17
1
0
0
intron-exon
5
Homo Sapiens
SplGraphs
NM_005476.6
5..407
99.8%
-
9

NM_000089.3
405..863
99.2%
+
7
1
0
0
exon-exon
6
Homo Sapiens
SplGraphs
NM_024700.3
1..546
99.9%
-
1

NM_000089.3
541..782
97.9%
+
7
1
0
0
exon-exon
7
Homo Sapiens
ChimerDB
NM_000088.3
25..94
100.0%
-
17

NM_000089.3
85..212
98.5%
+
7
1
0
0
exon-exonBREAKPOINTs
24564548
8
Homo Sapiens
ChimerDB
NM_000089.3
1..226
98.7%
+
7

XM_005266338.2
219..528
100.0%
-
13
2
0
1
exon-exon
9
Homo Sapiens
ChimerDB
XM_017017457.2
7..58
100.0%
+
11

NM_000089.3
59..700
100.0%
-
7
1
0
0
exon-exon
10
Homo Sapiens
ChimerDB
NR_027163.1
5..246
100.0%
+
17

NM_000089.3
243..360
97.4%
+
7
1
0
0
exon-exon

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