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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'COL18A1'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_130445.3
1..420
99.6%
+
21

ENST00000300145
398..429
100.0%
+
12
1
0
0
exon-intron
Homo Sapiens
XM_017028444.1
4..282
99.7%
-
21

NM_130445.3
280..319
100.0%
+
21
1
0
0
exon-exon
Homo Sapiens TRIM62
Q9BVG3
14..33
100.0%
-
1
19..477
100.0%
+
21
1
0
0
intron-intron
Homo Sapiens
NM_130445.3
1..197
98.5%
+
21

NM_130445.3
195..410
98.0%
+
21
1
0
0
exon-exon
Homo Sapiens SMURF2P1-LRRC37BP1
NR_015341.2
22..104
98.8%
+
17

NM_030582.3
101..167
100.0%
-
21
1
0
0
exon-intron
Homo Sapiens
NM_005121.2
2..144
99.4%
-
17

NM_130445.3
144..170
100.0%
-
21
1
0
0
exon-intron
Homo Sapiens
NM_130445.3
21..206
95.2%
-
21

XR_937809.3
91..210
97.5%
-
22
1
0
0
intron-intron

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