Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CLCN3'

Total of fusion sequences: 13 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_173872.3
1..92
100.0%
+
4
SMNDC1
O75940

XM_005269382.3
88..449
98.1%
-
10
1
0
0
exon-exonBREAKPOINTs
24564548
Homo Sapiens
NM_173872.3
1..131
100.0%
-
4
RP11-430H10.4 130..153
100.0%
-
11
1
0
0
exon-intron
Mus musculus
XR_001783628.1
1..66
97.0%
+
2

XM_017312553.1
15..793
96.9%
-
8
1
0
0
intron-exon
Mus musculus
XM_006508021.3
26..47
100.0%
-
7

NM_173874.1
37..130
99.0%
-
8
1
0
0
intron-exon
Homo Sapiens
NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
Homo Sapiens
NM_173872.3
2..67
100.0%
-
4

NM_173872.3
58..3945
99.9%
+
4
0
685
65535
exon-exon
Homo Sapiens
NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
Mus musculus
NM_173874.1
1..155
98.8%
+
8

NM_173874.1
141..213
95.9%
-
8
0
53
3386
exon-exon
Mus musculus
NM_173874.1
39..186
100.0%
+
8

NM_173874.1
182..722
99.9%
-
8
0
6
6264
exon-exon
Mus musculus
NM_173874.1
48..189
100.0%
+
8

NM_173874.1
186..629
100.0%
-
8
0
6
6264
exon-exon

T o p