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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CLCN3'

Total of fusion sequences: 13 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_173872.3
1..92
100.0%
+
4
SMNDC1
O75940

XM_005269382.3
88..449
98.1%
-
10
1
0
0
exon-exonBREAKPOINTs
24564548
2
Mus musculus

NM_173874.1
48..189
100.0%
+
8

NM_173874.1
186..629
100.0%
-
8
0
6
6264
exon-exon
3
Mus musculus

NM_173874.1
39..186
100.0%
+
8

NM_173874.1
182..722
99.9%
-
8
0
6
6264
exon-exon
4
Homo Sapiens

NM_173872.3
2..67
100.0%
-
4

NM_173872.3
58..3945
99.9%
+
4
0
685
65535
exon-exon
5
Mus musculus

NM_173874.1
1..155
98.8%
+
8

NM_173874.1
141..213
95.9%
-
8
0
53
3386
exon-exon
6
Homo Sapiens

NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
7
Homo Sapiens

NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
8
Homo Sapiens

NM_173872.3
1..131
100.0%
-
4
RP11-430H10.4 130..153
100.0%
-
11
1
0
0
exon-intron
9
Mus musculus

XR_001783628.1
1..66
97.0%
+
2

XM_017312553.1
15..793
96.9%
-
8
1
0
0
intron-exon
10
Mus musculus

XM_006508021.3
26..47
100.0%
-
7

NM_173874.1
37..130
99.0%
-
8
1
0
0
intron-exon

T o p