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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CLCN3'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_173872.3
1..92
100.0%
+
4
SMNDC1
O75940

XM_005269382.3
88..449
98.1%
-
10
1
0
0
exon-exonBREAKPOINTs
24564548
2
Homo Sapiens

NM_173872.3
2..67
100.0%
-
4

NM_173872.3
58..3945
99.9%
+
4
0
685
65535
exon-exon
3
Homo Sapiens

NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
4
Homo Sapiens

NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
5
Homo Sapiens

NM_173872.3
1..131
100.0%
-
4
RP11-430H10.4 130..153
100.0%
-
11
1
0
0
exon-intron
6
Homo Sapiens

NM_173872.3
8..555
100.0%
-
4

NM_004555.3
542..668
98.4%
-
16
1
0
0
exon-exon
7
Homo Sapiens

NM_173872.3
2..30
100.0%
+
4

XM_005255318.1
9..162
100.0%
+
16
1
0
0
intron-intron

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