Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CHP1'

Total of fusion sequences: 17 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens

NM_007236.4
10..115
100.0%
+
15

NM_007236.4
105..800
99.9%
+
15
0
889
1815
exon-exon
12
Homo Sapiens

XM_024446133.1
1..1243
100.0%
-
5

NM_007236.4
1238..2001
100.0%
+
15
1
0
0
exon-exon
13
Homo Sapiens

NM_007236.4
1..511
100.0%
+
15

NM_007236.4
507..574
100.0%
-
15
0
1238
12
exon-exon
14
Homo Sapiens

NM_007236.4
8..54
100.0%
-
15

NM_007236.4
53..352
100.0%
+
15
2
296
43
exon-exon
15
Homo Sapiens

NM_007236.4
19..360
100.0%
-
15

NM_007236.4
359..405
100.0%
+
15
2
296
43
exon-exon
16
Homo Sapiens

XM_005254202.3
1..311
100.0%
+
15

NM_007236.4
310..406
97.5%
-
15
1
0
0
exon-intron
17
Homo Sapiens

NM_007236.4
1..158
98.1%
+
15
CSE1L
P55060

NM_001316.3
151..177
96.3%
-
20
1
0
0
exon-intron

T o p