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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CHP1'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_017317714.1
16..305
99.7%
-
17

NM_019769.3
293..383
100.0%
+
2
1
0
0
exon-exon
2
Mus musculus

NM_019769.3
1..507
100.0%
+
2
Gm6367
Q8C6L9

NR_044992.1
499..534
97.1%
-
5
1
0
0
exon-intron
3
Mus musculus

XM_017317928.1
1..1073
98.9%
+
18

NM_019769.3
918..1081
95.8%
-
2
1
0
0
intron-intron
4
Mus musculus

XM_006538104.3
1..22
100.0%
+
4

NM_019769.3
6..792
97.3%
+
2
1
0
0
intron-exon
5
Mus musculus

NM_019769.3
1..566
99.0%
+
2

XM_006505122.1
557..643
95.5%
-
6
1
0
0
intron-exon
6
Mus musculus

NM_019769.3
43..208
99.4%
+
2

NM_001243123.1
206..541
95.6%
+
5
1
0
0
exon-intron
7
Mus musculus

NM_019769.3
23..857
98.8%
+
2

NM_008729.2
858..878
100.0%
+
15
1
0
0
intron-intron
8
Mus musculus

NM_019769.3
1..644
100.0%
+
2
Gm20056 179..732
97.5%
+
16
1
0
0
exon-exon

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