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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CHI3L1'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_001276.2
1..301
100.0%
-
1

NM_001079864.2
296..317
100.0%
-
7
0
1264
0
exon-intron
Homo Sapiens
NM_001079864.2
86..490
97.7%
+
7

NM_001276.2
459..516
100.0%
-
1
0
1264
0
intron-exon
Homo Sapiens
NM_001276.2
1..70
98.6%
-
1
LOC105371450
XR_922166.3
66..120
98.2%
+
1
1
0
0
exon-intron
Homo Sapiens
NM_001276.2
1..70
98.6%
-
1
LOC105371450
XR_922166.3
66..120
100.0%
+
1
1
0
0
exon-intron
Homo Sapiens
NM_001276.2
1..660
99.9%
-
1
GMDS
O60547

XR_001743349.2
656..689
97.0%
+
6
1
0
0
exon-intron
Homo Sapiens
NM_001276.2
19..180
100.0%
+
1

XM_024451134.1
164..645
98.0%
+
18
1
0
0
exon-intron
Homo Sapiens
NM_001276.2
1..1837
100.0%
-
1
EDIL3
O43854

NM_005711.4
1831..1854
100.0%
-
5
1
0
0
exon-intron
Homo Sapiens
NM_001276.2
1..73
100.0%
-
1

NM_001276.2
74..597
100.0%
-
1
1
0
0
intron-intron
Homo Sapiens
NM_001324133.1
1..114
98.3%
-
10

NM_001276.2
114..169
100.0%
+
1
1
0
0
exon-exon
Homo Sapiens
XM_011530333.3
1..307
100.0%
+
22

NM_001276.2
302..742
97.1%
-
1
1
0
0
intron-exon

T o p