Result for the search of Gene Name/NCBI ID(s): 'CDV3'

Total of fusion sequences: 7 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BM842661 ANNOTATION OF CHIMERA FUSION GenBank ID: BM842661 FASTA Head Gene (1) Alignment: ATF4 | OMIM: 604064 Tail Gene (2) Alignment: CDV3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 468 22 + 39520564 39521496 3 1 oncogene, protein-coding 55573 3 + 133589544 133589658 1 1 protein-coding 442 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ATF4 P18848 Q6ICP0 XM_017028807.2	2..332 97.6%	+ 22	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	328..442 99.2%	+ 3	1 0 0	exon-exon
2 Homo Sapiens	BI495149 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495149 FASTA Head Gene (1) Alignment: ADAM10 | OMIM: 602192 Tail Gene (2) Alignment: CDV3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 102 15 + 58727178 58727207 15 0 oncogene, protein-coding 55573 3 - 133590002 133590257 1 1 protein-coding 308 hg38 Updated: 2019-01-31 Owner: ChiTaRS	ADAM10 A0A024R5U5 A0A087WYG1 A0AV88 B5MC71 C9J9B4 H0YK32 H0YK87 H0YNC5 H3BS53 L8E9R5 O14672 NM_001110.3	16..45 100.0%	+ 15	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	46..301 98.5%	- 3	1 0 0	intron-exon
3 Homo Sapiens	BG954732 ANNOTATION OF CHIMERA FUSION GenBank ID: BG954732 FASTA Head Gene (1) Alignment: CDV3 Tail Gene (2) Alignment: IMPDH1 | OMIM: 146690 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55573 3 - 133587790 133588070 6 1 protein-coding 3614 7 + 128403730 128405836 5 1 protein-coding 366 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF4816 (PF16086, IPR032134) 43 109 148 0.00024 7.400 Domain of unknown function (DUF4816) IMPDH (PF00478, IPR001093) 345 397 872 6.2e-143 462.000 IMP dehydrogenase / GMP reductase domain Updated: 2019-02-22 Owner: ChiTaRS	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	6..281 99.0%	- 3	IMPDH1 A0A024R725 A0A3B3IRL5 C9J029 C9J381 C9K0R9 F8WDE9 H7C511 H7C5T1 P20839 NM_000883.3	272..366 100.0%	+ 7	1 0 0	exon-exon
4 Homo Sapiens	BI495150 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495150 FASTA Head Gene (1) Alignment: CDV3 Tail Gene (2) Alignment: DSCAM | OMIM: 602523 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55573 3 + 133590002 133590261 6 1 protein-coding 1826 21 + 40152111 40152145 16 0 protein-coding 306 hg38 Updated: 2019-02-17 Owner: ChiTaRS	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	6..265 100.0%	+ 3	DSCAM A0A087WUI7 O60469 Q8WY19 NM_001271534.2	259..290 96.9%	+ 21	1 0 0	exon-intron
5 Homo Sapiens	CB050968 ANNOTATION OF CHIMERA FUSION GenBank ID: CB050968 FASTA Head Gene (1) Alignment: LOC102724150 Tail Gene (2) Alignment: CDV3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 102724150 X - 89444829 89444850 0 0 ncRNA 55573 3 - 133589760 133590260 1 1 protein-coding 524 hg38 Updated: 2019-04-13 Owner: ChiTaRS	LOC102724150 XR_001755912.1	1..22 100.0%	- X	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247594.5	23..524 99.5%	- 3	1 0 0	intron-exon
6 Homo Sapiens	CF264945 ANNOTATION OF CHIMERA FUSION GenBank ID: CF264945 FASTA Head Gene (1) Alignment: DUSP18 | OMIM: 611446 Tail Gene (2) Alignment: CDV3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 150290 22 - 30655426 30655449 1 0 protein-coding 55573 3 + 133588798 133589662 1 1 protein-coding 875 hg38 Updated: 2019-01-09 Owner: ChiTaRS	DUSP18 A0A024R1L2 C9JEE9 F2Z2P2 F8VX42 H7C401 Q8NEJ0 XM_017028628.1	1..23 100.0%	- 22	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	8..875 98.1%	+ 3	1 0 0	intron-exon
7 Homo Sapiens	DA349409 ANNOTATION OF CHIMERA FUSION GenBank ID: DA349409 FASTA Head Gene (1) Alignment: CDV3 Tail Gene (2) Alignment: MBP | OMIM: 159430 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55573 3 + 133577977 133578425 2 0 protein-coding 4155 18 - 77016934 77017055 4 1 protein-coding 571 hg38 Updated: 2019-02-23 Owner: ChiTaRS	CDV3 D3DND1 D6R973 D6R9V8 D6RAV0 D6RDN0 D6RFH2 H0Y8K3 Q9UKY7 XM_005247592.4	1..449 100.0%	+ 3	MBP A0A024R384 A8MZH3 C9J6H1 E9PJ72 E9PKX9 E9PLQ9 E9PLU9 E9PMR5 E9PNZ1 E9PQE7 E9PSE2 F5H7N4 F8WEU6 H0YEA2 H0YF02 H7BYR8 J3KS94 J3KT01 J3KT34 J3QKL5 J3QKN5 J3QL64 J3QQK6 P02686 NM_001025101.1	449..570 100.0%	- 18	1 0 0	intron-exon

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