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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CDKN1B'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_001306129.1
86..176
99.0%
-
2

NM_004064.4
167..471
99.4%
+
12
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_001135694.2
1..627
99.7%
+
8

NM_004064.4
623..685
96.9%
+
12
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_004064.4
1..55
100.0%
+
12

XM_006721342.2
53..551
99.8%
+
16
1
0
0
exon-exon
Homo Sapiens
NM_004064.4
1..67
100.0%
+
12

NM_004064.4
60..539
99.8%
+
12
1
0
0
exon-exon
Homo Sapiens WARS2
Q9UGM6

XM_017000039.1
1..366
98.4%
+
1

NM_004064.4
365..540
99.5%
+
12
1
0
0
intron-intron

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