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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CDK5RAP2'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NR_073556.1
6..262
98.9%
-
9
TMOD1
P28289

NM_003275.3
260..684
100.0%
+
9
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NR_073556.1
6..56
100.0%
+
9

NM_001145928.1
49..206
100.0%
+
2
1
0
0
exon-exon
3
Homo Sapiens
MEGF9
Q9H1U4

NM_001080497.2
5..16
100.0%
-
9

NR_073556.1
17..413
100.0%
-
9
1
0
0
intron-intronBREAKPOINTs
29099951
4
Homo Sapiens

NR_073556.1
1..112
100.0%
+
9

NR_073556.1
106..258
100.0%
-
9
1
0
0
exon-exon
5
Homo Sapiens

NR_073556.1
4..57
100.0%
-
9

NM_001242607.1
54..385
98.2%
+
11
0
65535
59802
intron-intron
6
Homo Sapiens

NM_001076682.3
2..330
99.7%
-
11

NR_073556.1
330..521
96.9%
-
9
0
65535
59802
exon-intron
7
Homo Sapiens

NR_073556.1
1..113
98.3%
-
9

NM_012244.3
99..288
97.9%
+
14
1
0
0
exon-intron
8
Homo Sapiens

NR_073556.1
29..679
96.6%
+
9
HECTD2-AS1
NR_024467.1
98..683
96.9%
-
10
1
0
0
intron-intron
9
Homo Sapiens

NR_073556.1
13..531
100.0%
-
9
LOC107985508
XR_001754978.1
523..550
96.5%
-
21
1
0
0
exon-intron
10
Homo Sapiens

NR_073556.1
1..2212
97.4%
-
9

NR_049729.1
545..2416
95.7%
-
17
1
0
0
intron-intron

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