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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CDH2'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_011525788.1
1..47
97.9%
-
18

XM_011525788.1
43..201
98.2%
+
18
1
0
0
intron-intron
2
Homo Sapiens

NM_001297576.1
1..295
99.7%
+
1

XM_011525788.1
293..360
100.0%
+
18
1
0
0
exon-exon
3
Homo Sapiens

NR_105033.1
1..384
99.8%
-
8

XM_011525788.1
375..402
100.0%
+
18
1
0
0
exon-intron
4
Homo Sapiens

NM_001024843.1
11..186
100.0%
+
22

XM_011525788.1
179..368
99.5%
-
18
1
0
0
intron-exon
5
Homo Sapiens
TGFB2
P61812

NM_001135599.3
19..300
96.1%
-
1

XM_011525788.1
296..424
100.0%
-
18
1
0
0
exon-exon
6
Homo Sapiens

XM_011525788.1
1..24
100.0%
-
18

NM_021141.3
14..425
99.8%
-
2
1
0
0
intron-exon
7
Homo Sapiens

XM_011525788.1
1..30
100.0%
-
18

NM_001134671.2
29..644
99.2%
+
8
1
0
0
intron-exon
8
Homo Sapiens

XM_017025514.2
1..22
100.0%
-
18

NM_145234.3
19..348
99.4%
+
X
1
0
0
intron-exon
9
Homo Sapiens
35..56
100.0%
-
11
43..266
100.0%
-
18
1
0
0
intron-intron
10
Homo Sapiens
MALAT1
NR_144568.1
18..177
100.0%
+
11

XM_011525788.1
177..407
99.6%
-
18
1
0
0
exon-intron

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