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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CDH2'

Total of fusion sequences: 10 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_001297576.1
1..295
99.7%
+
1

XM_011525788.1
293..360
100.0%
+
18
1
0
0
exon-exon
Homo Sapiens
NR_105033.1
1..384
99.8%
-
8

XM_011525788.1
375..402
100.0%
+
18
1
0
0
exon-intron
Homo Sapiens
NM_001024843.1
11..186
100.0%
+
22

XM_011525788.1
179..368
99.5%
-
18
1
0
0
intron-exon
Homo Sapiens TGFB2
P61812

NM_001135599.3
19..300
96.1%
-
1

XM_011525788.1
296..424
100.0%
-
18
1
0
0
exon-exon
Homo Sapiens
XM_011525788.1
1..24
100.0%
-
18

NM_021141.3
14..425
99.8%
-
2
1
0
0
intron-exon
Homo Sapiens
XM_011525788.1
1..30
100.0%
-
18

NM_001134671.2
29..644
99.2%
+
8
1
0
0
intron-exon
Homo Sapiens
XM_017025514.2
1..22
100.0%
-
18

NM_145234.3
19..348
99.4%
+
X
1
0
0
intron-exon
Homo Sapiens
XM_011525788.1
1..47
97.9%
-
18

XM_011525788.1
43..201
98.2%
+
18
1
0
0
intron-intron
Homo Sapiens 35..56
100.0%
-
11
43..266
100.0%
-
18
1
0
0
intron-intron
Homo Sapiens MALAT1
NR_144568.1
18..177
100.0%
+
11

XM_011525788.1
177..407
99.6%
-
18
1
0
0
exon-intron

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