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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CDH11'

Total of fusion sequences: 11 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001308392.1
1..101
100.0%
-
16

NM_001304284.1
99..337
100.0%
+
17
3
0
0
exon-exonBREAKPOINTs
2
Homo Sapiens
ChimerDB
NM_001308392.1
1..225
100.0%
-
16

NM_001304284.1
224..520
100.0%
+
17
3
0
1
exon-exonBREAKPOINTs
3
Homo Sapiens
ChimerDB
NM_001308392.1
1..226
100.0%
-
16

NM_001304284.1
224..462
100.0%
+
17
3
0
0
exon-exonBREAKPOINTs
4
Homo Sapiens
ChimerDB
NM_001308392.1
1..101
100.0%
-
16

NM_001304284.1
98..183
100.0%
+
17
3
0
0
exon-exonBREAKPOINTs
5
Homo Sapiens

NM_001308392.1
1..226
100.0%
-
16

NM_001304284.1
224..308
100.0%
+
17
3
0
0
exon-exonBREAKPOINTs
6
Homo Sapiens
LOC105375999
XR_001746565.1
10..44
96.7%
-
9

XM_024450134.1
17..613
99.7%
+
16
1
0
0
intron-exon
7
Homo Sapiens
LOC105375999
XR_001746565.1
10..44
96.7%
-
9

XM_024450134.1
17..668
99.9%
+
16
1
0
0
intron-exon
8
Homo Sapiens

XM_017012774.2
4..210
100.0%
+
7

XM_024450134.1
204..455
99.7%
+
16
1
0
0
exon-intron
9
Homo Sapiens

NM_001308392.1
2..194
98.5%
+
16

NM_001308392.1
193..283
99.0%
-
16
1
0
0
exon-exon
10
Homo Sapiens

NM_001308392.1
13..351
99.2%
+
16

XM_017025133.2
345..499
98.7%
+
17
1
0
0
intron-exon

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