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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CDC5L'

Total of fusion sequences: 4 (from 2006899 parsed EST/mRNAs. Last update 2020-01-28 15:35:44)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB C5orf66
Q9H5L9

NM_001277348.1
19..560
99.9%
+
5
CDC5L
Q99459

NM_001253.3
555..746
97.9%
-
6
1
0
0
intron-exon
2
Homo Sapiens
CDC5L
Q99459

NM_001253.3
1..1972
99.9%
-
6

NM_001252613.1
1957..2268
100.0%
+
2
1
0
0
intron-exon
3
Homo Sapiens

NR_148940.1
8..569
100.0%
-
3
CDC5L
Q99459

NM_001253.3
563..593
100.0%
-
6
1
0
0
exon-intron
4
Homo Sapiens

XM_011539191.2
16..190
99.1%
+
10
CDC5L
Q99459

NM_001253.3
189..505
99.1%
+
6
1
0
0
exon-exon

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