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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CCND1'

Total of fusion sequences: 18 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_053056.2
9..307
99.7%
+
11
ATP5J2-PTCD1
NM_001198879.1
308..548
99.6%
-
7
1
0
0
exon-intron
2
Homo Sapiens
ChimerDB
NM_053056.2
1..604
99.7%
+
11

NM_002353.2
605..2401
100.0%
-
1
1
0
0
exon-exonBREAKPOINTs
18829570
3
Homo Sapiens
ChimerDB
NM_053056.2
1..103
97.1%
-
11

NM_138714.3
97..250
100.0%
+
16
1
0
0
exon-exon
4
Homo Sapiens
SplGraphs
XM_017012818.1
17..172
99.4%
+
7

NM_053056.2
168..219
100.0%
+
11
1
0
0
intron-exon
5
Homo Sapiens

NM_053056.2
1..604
99.7%
+
11

NM_002353.2
605..2401
100.0%
-
1
1
0
0
exon-exonBREAKPOINTs
18829570
6
Homo Sapiens

NM_053056.2
1..30
100.0%
+
11
30..59
100.0%
+
22
1
0
0
exon-intronBREAKPOINTs
8049438
15239399
7
Homo Sapiens

NM_053056.2
1..76
100.0%
+
11

ENST00000538554
77..180
100.0%
+
11
1
0
0
exon-intronBREAKPOINTs
29099951
8
Homo Sapiens

NM_053056.2
1..320
99.1%
+
11

NM_053056.2
314..388
98.7%
+
11
1
0
0
exon-exon
9
Homo Sapiens

NM_002791.2
1..28
100.0%
+
14

NM_053056.2
2..91
100.0%
+
11
1
0
0
intron-exon
10
Homo Sapiens

NM_053056.2
7..71
100.0%
-
11

XM_017012548.1
63..242
99.5%
-
7
1
0
0
exon-intron

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