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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CCDC40'

Total of fusion sequences: 5 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Fusion type,
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,151617
Homo Sapiens 1..192
96.1%
+
17
23..300
99.0%
+
8
1
0
0
Homo Sapiens 1..317
99.7%
-
8
146..342
96.6%
-
17
1
0
0
Homo Sapiens 5..2014
99.9%
+
17
2015..2045
95.2%
-
12
1
0
0
Homo Sapiens 1..34
97.1%
+
17
GTF2H2 16..43
96.5%
-
5
1
0
0
Homo Sapiens 1..606
97.1%
-
7
603..622
100.0%
+
17
1
0
0