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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CASK'

Total of fusion sequences: 27 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_003688.3
3..181
97.8%
-
X

ENST00000544807
157..204
100.0%
-
14
1
0
0
intron-intronMCF7
2
Homo Sapiens
ASCL2
Q99929

NM_005170.2
1..1849
100.0%
-
11

NM_003688.3
1834..1858
96.0%
+
X
1
0
0
exon-intron
3
Homo Sapiens

NM_003688.3
13..201
99.0%
+
X

NM_003688.3
201..350
100.0%
-
X
0
65535
65535
exon-exon
4
Homo Sapiens

NM_003688.3
1..176
99.5%
+
X

NM_003688.3
175..338
99.4%
+
X
0
65535
65535
exon-exon
5
Homo Sapiens

NM_003688.3
1..97
95.8%
-
X

XM_011534812.2
62..374
99.7%
-
12
3
11
34
intron-intron
6
Homo Sapiens

NM_003688.3
2..80
96.1%
-
X

XM_011534812.2
45..323
99.7%
-
12
3
7
0
intron-intron
7
Homo Sapiens

NM_003688.3
1..86
95.2%
-
X

XM_011534812.2
51..329
99.7%
-
12
3
7
0
intron-intron
8
Homo Sapiens

XM_017013811.1
1..389
99.8%
-
8

NM_003688.3
85..397
98.4%
-
X
1
0
0
exon-intron
9
Homo Sapiens

XM_017013811.1
1..328
99.7%
-
8

NM_003688.3
22..336
97.8%
-
X
1
0
0
exon-intron
10
Homo Sapiens

NM_003688.3
6..118
98.3%
+
X
RPS3AP5 17..537
97.9%
-
10
5
0
26
intron-exon

T o p