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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CAP2'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_017019081.1
13..33
100.0%
-
12

NM_006366.2
34..363
97.0%
-
6
1
0
0
intron-exon
Homo Sapiens
NM_006366.2
1..357
99.5%
-
6
GTF2IP4
NR_003580.2
324..363
95.2%
+
7
1
0
0
intron-intron
Homo Sapiens
XM_011513686.3
1..616
96.5%
-
4

NM_006366.2
571..720
96.0%
-
6
1
0
0
intron-intron
Homo Sapiens
NM_006366.2
8..29
100.0%
-
6

XM_017021246.1
20..93
100.0%
-
14
1
0
0
intron-exon
Homo Sapiens
NM_006366.2
1..343
98.0%
-
6

NM_001204408.1
322..364
95.6%
+
17
1
0
0
intron-intron
Homo Sapiens
NM_006366.2
1..161
97.5%
-
6

XM_017002307.1
160..334
100.0%
+
1
1
0
0
exon-exon
Homo Sapiens
NM_001190766.1
81..252
95.8%
+
6

NM_006366.2
253..383
95.8%
+
6
1
0
0
intron-intron

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