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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CALR'

Total of fusion sequences: 38 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
31
Homo Sapiens

NM_004343.3
8..295
100.0%
+
19

XM_011513447.2
274..315
95.3%
-
4
1
0
0
exon-intron
32
Homo Sapiens

NM_004343.3
8..360
99.2%
+
19

NM_174886.2
353..376
95.9%
+
18
1
0
0
exon-intron
33
Homo Sapiens

XM_017026290.1
15..43
100.0%
+
19

NM_004343.3
39..122
96.4%
-
19
1
0
0
intron-exon
34
Homo Sapiens

NM_004343.3
1..639
99.3%
+
19
LINC01515
NR_120647.1
627..654
100.0%
-
10
1
0
0
exon-intron
35
Homo Sapiens
LOC105372981
XR_938124.2
5..29
100.0%
-
22

NM_004343.3
30..426
97.7%
-
19
1
0
0
intron-exon
36
Homo Sapiens

XM_024449560.1
13..82
95.6%
+
14

NM_004343.3
71..115
100.0%
-
19
1
0
0
intron-exon
37
Homo Sapiens

NM_001997.4
20..101
100.0%
+
11

NM_004343.3
98..950
99.1%
-
19
1
0
0
exon-exon
38
Homo Sapiens

NM_001243812.1
6..421
97.5%
-
9

NM_004343.3
19..438
99.8%
-
19
1
0
0
intron-exon

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