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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CALR'

Total of fusion sequences: 40 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Homo Sapiens

NM_004343.3
1..56
100.0%
-
19

NM_004343.3
52..473
99.6%
+
19
5
0
0
exon-exon
22
Homo Sapiens

NM_004343.3
8..315
100.0%
+
19

XM_017026100.1
310..339
100.0%
-
18
1
0
0
exon-intron
23
Homo Sapiens

NM_004343.3
8..315
99.4%
+
19

XM_017026100.1
310..339
100.0%
-
18
1
0
0
exon-intron
24
Homo Sapiens

XM_017002579.2
1..230
100.0%
+
1

NM_004343.3
224..320
99.0%
+
19
1
0
0
exon-exon
25
Homo Sapiens
LINC00976
ENST00000643616
34..120
100.0%
+
8

NM_004343.3
117..580
98.8%
-
19
1
0
0
exon-exon
26
Homo Sapiens

NM_004343.3
1..258
100.0%
+
19
COX1
250..309
98.4%
+
MT
1
0
0
exon-exon
27
Homo Sapiens

NM_001098816.2
33..304
98.2%
+
11

NM_004343.3
295..453
100.0%
+
19
1
0
0
intron-exon
28
Homo Sapiens

XR_001740396.1
10..248
98.8%
-
3

NM_004343.3
246..380
100.0%
-
19
1
0
0
exon-exon
29
Homo Sapiens

NM_004343.3
8..277
99.3%
+
19

XM_006724242.4
274..299
100.0%
+
22
1
0
0
exon-intron
30
Homo Sapiens

NM_004343.3
5..67
100.0%
-
19

XM_017024654.2
18..70
98.2%
-
17
1
0
0
exon-exon

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