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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'CALR'

Total of fusion sequences: 38 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens

NM_004343.3
4..342
99.8%
-
19

NM_004343.3
341..459
98.3%
+
19
5
21
512
exon-exonMCF7
12
Homo Sapiens

NM_080615.1
18..493
100.0%
-
20

NM_004343.3
493..728
97.4%
+
19
0
5276
0
intron-exon
13
Homo Sapiens

NM_004343.3
37..431
97.2%
-
19

NM_004343.3
427..537
96.4%
-
19
0
3599
44
exon-exon
14
Homo Sapiens

NM_004343.3
1..164
99.4%
-
19

NM_004343.3
163..228
100.0%
+
19
5
613
541
exon-exon
15
Homo Sapiens

NM_004343.3
1..32
100.0%
-
19

NM_004343.3
29..103
100.0%
+
19
5
613
541
exon-exon
16
Homo Sapiens

NM_004343.3
17..75
96.6%
-
19

NM_004343.3
61..318
98.9%
+
19
5
36
183
exon-exon
17
Homo Sapiens

NM_004343.3
14..206
99.0%
+
19

NM_004343.3
203..354
99.4%
-
19
5
36
183
exon-exon
18
Homo Sapiens

XM_011516886.3
1..39
100.0%
+
8

NM_004343.3
33..233
98.6%
-
19
1
0
0
intron-exon
19
Homo Sapiens

NM_004343.3
9..208
100.0%
+
19

XM_011516886.3
202..240
100.0%
-
8
1
0
0
exon-intron
20
Homo Sapiens

NM_004343.3
1..56
100.0%
-
19

NM_004343.3
52..473
99.6%
+
19
5
0
0
exon-exon

T o p