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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'C5orf42'

Total of fusion sequences: 8 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001745.3
1..245
100.0%
+
5

XR_925644.2
245..519
100.0%
-
5
1
0
0
exon-exon
2
Homo Sapiens

XR_925644.2
18..223
95.7%
-
5
RPS4XP7 26..224
95.7%
-
6
1
0
0
intron-exon
3
Homo Sapiens

XR_925644.2
40..242
95.6%
-
5
RPS4XP7 47..243
95.6%
-
6
1
0
0
intron-exon
4
Homo Sapiens

XR_925644.2
1..105
100.0%
+
5

NM_001324301.1
105..339
99.6%
+
20
1
0
0
exon-exon
5
Homo Sapiens

XM_017006670.2
25..263
100.0%
-
3

XM_011514089.2
264..290
100.0%
-
5
1
0
0
exon-exon
6
Homo Sapiens

NM_014584.2
8..107
100.0%
-
14

XR_925644.2
83..124
100.0%
+
5
1
0
0
exon-intron
7
Homo Sapiens
50..72
95.7%
-
6
58..77
100.0%
+
5
1
0
0
intron-intron
8
Homo Sapiens

XR_925644.2
1..26
100.0%
+
5

NM_003211.4
8..106
99.0%
-
12
1
0
0
intron-exon

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