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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Bckdha'

Total of fusion sequences: 37 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_011321.3
21..668
98.6%
+
17

XM_006539486.3
668..701
100.0%
-
7
2
172
0
exon-intron
2
Mus musculus

NM_011321.3
29..695
98.7%
+
17

XM_006539486.3
692..726
100.0%
-
7
2
172
0
exon-intron
3
Mus musculus

NM_026794.2
52..479
99.8%
+
9

XM_006539486.3
476..510
100.0%
-
7
1
0
0
exon-intron
4
Mus musculus

NM_030147.3
57..474
99.6%
-
18

XM_006539486.3
474..502
100.0%
-
7
1
0
0
exon-intron
5
Mus musculus

XM_006517156.1
22..725
99.8%
-
13

XM_006539486.3
724..756
100.0%
-
7
1
0
0
exon-intron
6
Mus musculus
Gm4928 44..478
97.1%
-
12

XM_006539486.3
479..512
100.0%
-
7
1
0
0
intron-intron
7
Mus musculus

NM_010905.3
54..571
98.9%
+
4

XM_006539486.3
561..586
100.0%
-
7
1
0
0
intron-intron
8
Mus musculus

NM_001291068.1
60..465
100.0%
-
11

XM_006539486.3
462..492
100.0%
-
7
1
0
0
exon-intron
9
Mus musculus

NM_011271.2
20..796
99.7%
-
14

XM_006539486.3
785..820
100.0%
-
7
1
0
0
exon-intron
10
Mus musculus

NM_023865.3
18..754
99.9%
+
4

XM_006539486.3
753..787
100.0%
-
7
1
0
0
exon-intron

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