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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'BRF1'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_005267561.4
1..228
96.6%
-
14
AHNAK2
Q8IVF2

NM_138420.3
229..293
96.6%
-
14
1
0
0
intron-intron
2
Homo Sapiens

XR_001753275.1
6..226
99.6%
+
18

XM_005267561.4
214..307
99.0%
-
14
1
0
0
exon-intron
3
Homo Sapiens

NM_001519.3
27..119
95.3%
+
14

NM_004810.3
73..120
98.0%
+
22
1
0
0
intron-intron
4
Homo Sapiens

NM_004553.4
1..490
100.0%
+
5

NM_001519.3
480..526
97.6%
-
14
1
0
0
exon-intron
5
Homo Sapiens
3..142
100.0%
+
14
131..197
100.0%
-
19
1
0
0
exon-exon
6
Homo Sapiens

XM_005267561.4
1..31
100.0%
-
14

NM_001135690.2
20..497
100.0%
+
8
1
0
0
intron-exon
7
Homo Sapiens

XM_005267563.4
13..288
99.7%
-
14

NR_148462.1
284..497
98.6%
-
13
1
0
0
intron-exon
8
Homo Sapiens

NM_000099.3
8..76
98.6%
+
20

XM_005267561.4
63..265
98.6%
+
14
1
0
0
exon-intron
9
Homo Sapiens
ARSEP1 1..30
100.0%
-
Y

XM_005267561.4
23..644
100.0%
+
14
1
0
0
intron-exon

T o p