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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'BCL2L11'

Total of fusion sequences: 8 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus		SplGraphs

ANNOTATION OF CHIMERA FUSION

GenBank ID: BE633259 FASTA
Head Gene (1) Alignment: Bcl2l11 Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
121252+12816125512816130611protein-coding121252+12816083712816110011protein-coding 316 mm10
Updated: 2019-05-28
Owner: ChiTaRS
XM_006498616.3		1..52
100.0%		+
2
XM_006498616.3		53..316
99.7%		+
2		0
142
1251		exon-exon

Hi-C contacts of chimeric junction

Fusion Gene1 chromo-
some1		 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo-
some2		 junction start2 junction end2 Hi-C point2 Δ2 Cell lines
(Cell_ID,)		 PubMed(,s)
2319--32-825--33-34-
BE633259 Bcl2l11 2 128161305 128161306 128160000 1305 Bcl2l11 2 128160837 128160838 128160000 837 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249
2
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC019556 FASTA
UniProtKB: O54918 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 Bim
Head Gene (1) Alignment: Acoxl Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
741212+12812604412812625211121252+12812862012815862641protein-coding 1137 mm10
Updated: 2019-06-15
Owner: ChiTaRS
Acoxl
Q9DBS4
XM_006500273.2		1..209
100.0%		+
2
XM_006498616.3		210..1110
100.0%		+
2		1
0
0		exon-exonBREAKPOINTs
25500544
3
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: NM_009754 FASTA
UniProtKB: O54918 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 Bim
UniProtKB: Q3U7X3 BCL2-like 11 (Apoptosis facilitator), isoform CRA_a
Fusion Gene(s): Bcl2l11 mCG_11895
UniProtKB: Q542N5 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 mCG_11895
Head Gene (1) Alignment: Acoxl Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
741212+12812603812812625211121252+12812862012816254741protein-coding 4782 mm10
Updated: 2019-06-11
Owner: ChiTaRS
Acoxl
Q9DBS4
XM_006500273.2		1..215
100.0%		+
2
XM_006498616.3		216..4779
100.0%		+
2		1
0
0		exon-exonBREAKPOINTs
25500544
4
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: NM_207680 FASTA
UniProtKB: O54918 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 Bim
UniProtKB: Q542N5 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 mCG_11895
Head Gene (1) Alignment: Acoxl Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
741212+12812603812812625211121252+12812862012816254741protein-coding 5040 mm10
Updated: 2019-06-11
Owner: ChiTaRS
Acoxl
Q9DBS4
XM_006500273.2		1..215
100.0%		+
2
XM_006498616.3		216..5037
100.0%		+
2		1
0
0		exon-exonBREAKPOINTs
25500544
5
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: NM_207681 FASTA
UniProtKB: O54918 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 Bim
UniProtKB: Q542N5 Bcl-2-like protein 11 (Bcl2-L-11) (Bcl2-interacting mediator of cell death)
Fusion Gene(s): Bcl2l11 mCG_11895
Head Gene (1) Alignment: Acoxl Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
741212+12812603812812625211121252+12812862012816254741protein-coding 4872 mm10
Updated: 2019-06-11
Owner: ChiTaRS
Acoxl
Q9DBS4
XM_006500273.2		1..215
100.0%		+
2
XM_006498616.3		216..4869
100.0%		+
2		1
0
0		exon-exonBREAKPOINTs
25500544
6
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: NM_001291016 FASTA
UniProtKB: Q3TR86 Uncharacterized protein (Fragment)
Fusion Gene(s): Bcl2l11
UniProtKB: Q6PEB3 Bcl-2-like protein 11 (Bcl2l11 protein)
Fusion Gene(s): Bcl2l11
Head Gene (1) Alignment: Acoxl Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
741212+12812603812812625211121252+12812862012813149831protein-coding 2304 mm10
Updated: 2019-06-11
Owner: ChiTaRS
Acoxl
Q9DBS4
XM_006500273.2		1..215
100.0%		+
2
NM_001291016.1		216..2304
100.0%		+
2		1
0
0		exon-exonBREAKPOINTs
25500544
7
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC066659 FASTA
Head Gene (1) Alignment: Bcl2l11 Tail Gene (2) Alignment: Bcl2l11 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
121252-12816000412816035211protein-coding121252+12815991012816124211protein-coding 1670 mm10
Updated: 2019-05-28
Owner: ChiTaRS
XM_006498616.3		1..349
100.0%		-
2
XM_006498616.3		346..1670
100.0%		+
2		0
142
1251		exon-exon

Hi-C contacts of chimeric junction

Fusion Gene1 chromo-
some1		 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo-
some2		 junction start2 junction end2 Hi-C point2 Δ2 Cell lines
(Cell_ID,)		 PubMed(,s)
2319--32-825--33-34-
BC066659 Bcl2l11 2 128160349 128160352 128160000 349 Bcl2l11 2 128159910 128159913 128150000 9910 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249
BC066659 Bcl2l11 2 128160349 128160352 128160000 349 Bcl2l11 2 128159910 128159913 128160000 87 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249
8
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BI684095 FASTA
Head Gene (1) Alignment: Bcl2l11 Tail Gene (2) Alignment: B430212C06Rik Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
121252+12815990312816023111protein-coding33836018-673336876733401700 651 mm10
Updated: 2019-06-05
Owner: ChiTaRS
XM_006498616.3		12..341
98.2%		+
2		 B430212C06Rik
Q8BQS0
NR_033214.1		195..394
95.8%		-
18		1
0
0		exon-intron

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