Result for the search: Gene Name/NCBI ID(s): 'Axin1'

Total of fusion sequences: 6 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	-	16	17
Mus musculus	CA528776 ANNOTATION OF CHIMERA FUSION GenBank ID: CA528776 FASTA Head Gene (1) Alignment: Axin1 Tail Gene (2) Alignment: Kdm1a Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12005 17 - 26153500 26153675 0 0 protein-coding 99982 4 - 136585059 136585478 0 0 protein-coding 600 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	22..197 100.0%	- 17	Kdm1a A3KG93 F6Z4I3 F6ZC60 G8JL40 Q6ZQ88 XM_006539329.3	174..596 98.6%	- 4	1 0 0	intron-intron
Mus musculus	BC099508 ANNOTATION OF CHIMERA FUSION GenBank ID: BC099508 FASTA Head Gene (1) Alignment: Axin1 Tail Gene (2) Alignment: Traf3ip1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12005 17 - 26179528 26179893 0 0 protein-coding 74019 1 - 91528010 91529307 1 1 protein-coding 1324 mm10 Updated: 2019-06-15 Owner: ChiTaRS	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	9..228 95.9%	- 17	Traf3ip1 A0A087WQD8 Q149C2 XM_006529896.2	23..1324 99.4%	- 1	1 0 0	intron-exon
Mus musculus	DV070184 ANNOTATION OF CHIMERA FUSION GenBank ID: DV070184 FASTA Head Gene (1) Alignment: Axin1 Tail Gene (2) Alignment: Axin1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12005 17 + 26153895 26154141 0 0 protein-coding 12005 17 + 26153488 26153667 0 0 protein-coding 996 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	31..277 99.6%	+ 17	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	270..449 96.9%	+ 17	1 0 0	intron-intron
Mus musculus	AW495999 ANNOTATION OF CHIMERA FUSION GenBank ID: AW495999 FASTA Head Gene (1) Alignment: Axin1 Tail Gene (2) Alignment: Smim6 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12005 17 + 26159487 26163698 0 0 protein-coding 68528 11 + 115913151 115913507 1 0 364 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	1..72 95.7%	+ 17	Smim6 Q3U0I6 NM_001162998.1	9..364 99.2%	+ 11	1 0 0	intron-intron
Mus musculus	AI987831 ANNOTATION OF CHIMERA FUSION GenBank ID: AI987831 FASTA Head Gene (1) Alignment: Calr3 Tail Gene (2) Alignment: Axin1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 73316 8 - 72275840 72429093 4 0 12005 17 - 26195458 26195539 1 1 protein-coding 287 mm10 Updated: 2019-05-29 Owner: ChiTaRS	Calr3 B1Q2L7 Q8BL82 Q9D373 Q9D9Q6 NM_028500.3	2..211 95.8%	- 8	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	206..287 97.6%	- 17	1 0 0	intron-exon
Mus musculus	BI988657 ANNOTATION OF CHIMERA FUSION GenBank ID: BI988657 FASTA Head Gene (1) Alignment: Axin1 Tail Gene (2) Alignment: Rad54l2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12005 17 - 25733004 26157640 3 0 protein-coding 81000 9 - 106425216 106756784 21 0 protein-coding 600 mm10 Updated: 2019-06-15 Owner: ChiTaRS	Axin1 E9QMJ8 F6SKQ8 O35625 Q14DJ8 Q6IS36 Q7TMI9 XM_006523515.3	6..340 96.3%	- 17	Rad54l2 A0A087WP96 A0A087WPJ6 E9QKL0 O35695 Q3UQR8 Q99NG0 NM_030730.2	330..397 95.0%	- 9	1 0 0	intron-intron

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