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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Atg3'

Total of fusion sequences: 4 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NR_027958.1
1..490
99.8%
+
11
Atg3
Q9CPX6

NM_026402.3
484..828
100.0%
+
16
2
194
0
exon-exon
2
Mus musculus

NR_027958.1
1..491
99.6%
+
11
Atg3
Q9CPX6

NM_026402.3
485..809
98.2%
+
16
2
194
0
exon-exon
3
Mus musculus

XM_006496717.1
110..191
100.0%
-
1
Atg3
Q9CPX6

NM_026402.3
188..427
97.1%
-
16
1
0
0
exon-intron
4
Mus musculus

XM_006525748.3
1..864
95.9%
-
18
Atg3
Q9CPX6

NM_026402.3
11..2091
100.0%
+
16
1
0
0
exon-intron

T o p