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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Apoc1'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_028900.4
12..1064
100.0%
-
6

NM_001110009.2
1060..1328
100.0%
-
7
1
0
0
exon-exon
2
Mus musculus

NM_001110009.2
1..278
99.7%
+
7

NM_009656.4
274..364
100.0%
+
5
1
0
0
exon-exon
3
Mus musculus

NM_001110009.2
38..443
100.0%
-
7
B230219D22Rik
Q922W8

NM_181278.2
440..463
100.0%
+
13
1
0
0
exon-intron
4
Mus musculus
Malat1
B0LAE7

NR_002847.2
35..781
99.8%
-
19

NM_001110009.2
782..811
97.2%
+
7
1
0
0
exon-intron
5
Mus musculus

NM_001110009.2
38..447
99.8%
-
7

NM_022018.3
445..468
100.0%
-
1
1
0
0
exon-intron
6
Mus musculus

NM_001110009.2
38..444
99.6%
-
7

XM_011247963.2
440..463
100.0%
-
1
1
0
0
exon-intron
7
Mus musculus

NM_026438.4
1..263
100.0%
-
10

NM_001110009.2
264..459
99.5%
-
7
1
0
0
exon-exon
8
Mus musculus

NM_001110009.2
38..482
97.6%
-
7

NM_033314.3
471..492
95.5%
-
9
1
0
0
exon-intron

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