Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Actr1a'

Total of fusion sequences: 11 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_016860.1
1..192
99.5%
-
19

NM_001013362.2
187..682
98.8%
-
15
1
0
0
exon-intron
2
Mus musculus

NM_016860.1
1..403
99.8%
+
19

NM_016860.1
384..620
100.0%
-
19
1
0
0
exon-exon
3
Mus musculus

NM_016860.1
1..2734
99.4%
-
19

NM_199447.2
2702..2753
97.4%
+
19
3
2
0
exon-intron
4
Mus musculus

NM_016860.1
1..2749
100.0%
-
19

NM_199447.2
2717..2766
97.3%
+
19
3
0
0
exon-intron
5
Mus musculus

NM_199447.2
1..50
95.2%
-
19

NM_016860.1
18..245
97.4%
+
19
3
0
0
intron-exon
6
Mus musculus

NM_013558.2
1..50
97.3%
-
17

NM_016860.1
18..283
100.0%
+
19
1
0
0
intron-exon
7
Mus musculus

NM_023799.3
1..353
100.0%
-
19

NM_016860.1
342..364
100.0%
-
19
1
0
0
exon-intron
8
Mus musculus

NM_016860.1
1..2687
100.0%
-
19
Gm34338
XR_384436.3
2655..2704
97.3%
+
15
1
0
0
exon-intron
9
Mus musculus

XM_006523651.3
3..50
97.1%
-
17

NM_016860.1
18..142
100.0%
+
19
1
0
0
intron-exon
10
Mus musculus

XR_001782603.1
1..46
96.9%
-
19

NM_016860.1
14..318
95.7%
+
19
1
0
0
intron-exon

T o p