Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'ATXN2'

Total of fusion sequences: 19 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Fusion type,
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,151617
Homo Sapiens ChimerDB 1..70
100.0%
+
12
63..586
99.7%
-
X
1
0
0
Homo Sapiens 274..345
99.4%
-
12
341..1158
96.5%
-
12
1
0
0
BREAKPOINTs
29099951
Homo Sapiens 159..383
95.1%
+
12
363..420
96.5%
+
19
1
0
0
Homo Sapiens 16..220
96.1%
+
12
205..381
99.5%
-
12
0
10923
12755
Homo Sapiens 28..97
95.6%
-
12
92..420
100.0%
-
12
0
65535
65535
Homo Sapiens 8..268
95.0%
-
12
191..385
98.5%
-
12
1
0
0
Homo Sapiens 3..261
95.0%
-
12
184..378
98.5%
-
12
1
0
0
Homo Sapiens 4..255
97.4%
-
15
23..438
98.8%
+
12
1
0
0
Homo Sapiens FAM117B
Q6P1L5
12..50
97.5%
+
2
42..160
95.0%
+
12
1
0
0
Homo Sapiens 8..235
97.0%
+
12
UBXN2A
P68543
198..301
95.2%
+
2
1
0
0