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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ATRX'

Total of fusion sequences: 10 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XR_001755700.2
751..911
95.6%
-
X

NM_032121.5
912..930
95.6%
-
X
1
0
0
intron-intronBREAKPOINTs
28783718
29099951
2
Homo Sapiens

XM_017029605.1
1..267
95.2%
+
X

NM_000052.6
268..379
95.2%
+
X
0
65535
1921
intron-intron
3
Homo Sapiens

XR_001755700.2
22..129
95.7%
+
X

NM_000052.6
130..435
95.7%
+
X
0
65535
1921
intron-intron
4
Homo Sapiens
LOC101927043
NR_110208.1
1..133
97.0%
+
2

XM_017029605.1
111..140
100.0%
+
X
1
0
0
intron-intron
5
Homo Sapiens

XM_011542829.2
1..145
100.0%
+
11

XM_017029605.1
144..189
97.8%
+
X
1
0
0
intron-intron
6
Homo Sapiens
AL136441.1 2..25
100.0%
+
13

XR_001755700.2
18..432
99.6%
+
X
1
0
0
intron-exon
7
Homo Sapiens

XR_001755700.2
19..93
100.0%
+
X

NM_001323312.1
87..210
99.2%
+
8
1
0
0
intron-exon
8
Homo Sapiens
615..640
96.2%
+
1
622..668
96.6%
+
X
1
0
0
intron-intron
9
Homo Sapiens

XR_001755700.2
16..100
96.2%
-
X

NM_001330653.1
65..248
96.3%
+
9
1
0
0
intron-intron
10
Homo Sapiens

NM_001018.4
1..474
100.0%
+
19

XM_017029605.1
473..496
100.0%
-
X
1
0
0
exon-intron

T o p