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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ARPC1B'

Total of fusion sequences: 13 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_014742.3
4..116
99.2%
+
20

XM_006715826.2
112..455
99.5%
+
7
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_005720.3
1..87
100.0%
+
7

XR_001740239.1
85..564
100.0%
-
3
1
0
0
exon-exon
3
Homo Sapiens

XM_006715826.2
2..69
100.0%
+
7

NM_005720.3
63..475
99.3%
+
7
0
6409
4697
exon-exon
4
Homo Sapiens

XM_006715826.2
21..85
98.5%
-
7

XM_006715826.2
81..229
100.0%
+
7
2
110
104
exon-exon
5
Homo Sapiens

XM_006715826.2
5..79
100.0%
-
7

XM_006715826.2
77..157
100.0%
+
7
2
110
104
exon-exon
6
Homo Sapiens
1..566
100.0%
+
7
LINC00504 547..569
100.0%
-
4
1
0
0
intron-intron
7
Homo Sapiens
1..566
99.9%
+
7
LINC00504 547..569
100.0%
-
4
1
0
0
intron-intron
8
Homo Sapiens
1..567
100.0%
+
7
LINC00504 548..570
100.0%
-
4
1
0
0
intron-intron
9
Homo Sapiens

XR_001740045.1
8..27
100.0%
-
3

XM_006715826.2
21..475
100.0%
+
7
1
0
0
intron-exon
10
Homo Sapiens

XM_024446628.1
1..325
95.6%
+
7

XM_011538562.2
325..807
98.3%
-
12
1
0
0
intron-exon

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