Result for the search of Gene Name/NCBI ID(s): 'ARAP3'

Total of fusion sequences: 3 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BQ335751 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ335751 FASTA Head Gene (1) Alignment: ARAP3 | OMIM: 606647 Tail Gene (2) Alignment: BSDC1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 64411 5 - 141656219 141656631 7 1 protein-coding 55108 1 - 32369244 32369395 10 1 protein-coding 327 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to SAM_2 (PF07647, IPR011510) 66 5 64 1.4e-15 43.500 SAM domain (Sterile alpha motif) PH (PF00169, IPR001849, SM00233) 105 288 379 1.5e-16 47.200 PH domain ArfGap (PF01412, IPR001164, SM00105) 117 489 607 4.3e-34 103.300 Putative GTPase activating protein for Arf RhoGAP (PF00620, IPR000198, SM00324) 152 920 1073 6.9e-43 132.300 RhoGAP domain RA (PF00788, IPR000159, SM00314) 93 1117 1210 7.4e-16 44.900 Ras association (RalGDS/AF-6) domain Updated: 2019-02-21 Owner: ChiTaRS	ARAP3 G5E9Y3 Q05CA7 Q05CH1 Q8WWN8 Q96G49 XM_005268499.1	3..185 98.4%	- 5	BSDC1 E9PNA9 E9PQA7 E9PS77 F8W6C6 Q9NW68 NR_125352.1	176..327 98.1%	- 1	1 0 0	exon-exon
2 Homo Sapiens	ChimerDB BQ335833 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ335833 FASTA Head Gene (1) Alignment: ARAP3 | OMIM: 606647 Tail Gene (2) Alignment: BSDC1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 64411 5 - 141656219 141656637 7 1 protein-coding 55108 1 - 32369244 32369395 10 1 protein-coding 333 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to SAM_2 (PF07647, IPR011510) 66 5 64 1.4e-15 43.500 SAM domain (Sterile alpha motif) PH (PF00169, IPR001849, SM00233) 105 288 379 1.5e-16 47.200 PH domain ArfGap (PF01412, IPR001164, SM00105) 117 489 607 4.3e-34 103.300 Putative GTPase activating protein for Arf RhoGAP (PF00620, IPR000198, SM00324) 152 920 1073 6.9e-43 132.300 RhoGAP domain RA (PF00788, IPR000159, SM00314) 93 1117 1210 7.4e-16 44.900 Ras association (RalGDS/AF-6) domain Updated: 2019-02-21 Owner: ChiTaRS	ARAP3 G5E9Y3 Q05CA7 Q05CH1 Q8WWN8 Q96G49 XM_005268499.1	1..191 97.9%	- 5	BSDC1 E9PNA9 E9PQA7 E9PS77 F8W6C6 Q9NW68 NR_125352.1	182..333 98.1%	- 1	1 0 0	exon-exon
3 Homo Sapiens	AX396940 ANNOTATION OF CHIMERA FUSION GenBank ID: AX396940 FASTA Head Gene (1) Alignment: ZC3H11A | OMIM: 613513 Tail Gene (2) Alignment: ARAP3 | OMIM: 606647 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9877 1 + 203852422 203852571 20 1 protein-coding 64411 5 + 141653549 141653932 33 1 protein-coding 535 hg38 Updated: 2019-01-31 Owner: ChiTaRS	ZC3H11A A0A1W2PPR9 C9J0L0 E9PBY7 E9PQ61 O75152 Q0D2N5 NM_001350262.1	1..150 100.0%	+ 1	ARAP3 G5E9Y3 Q05CA7 Q05CH1 Q8WWN8 Q96G49 XM_005268499.1	151..535 99.0%	+ 5	1 0 0	exon-exon

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