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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'APOB'

Total of fusion sequences: 7 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1789,10,1112,2513,14,151617
Homo SapiensSplGraphs 1..367
100.0%
-
2
359..660
100.0%
+
4
1
0
0
Homo Sapiens ChimerDB 1..102
99.1%
-
2
95..233
96.4%
-
16
1
0
0
Homo Sapiens 1..197
100.0%
-
17
196..470
100.0%
+
2
1
0
0
Homo Sapiens TALAM1 1..1173
100.0%
-
11
1160..1719
99.5%
-
2
1
0
0
Homo Sapiens DDX19A 6..287
99.0%
+
16
287..461
100.0%
-
2
1
0
0
Homo Sapiens 1..592
100.0%
-
2
586..718
98.5%
-
4
1
0
0
Homo Sapiens 448..523
100.0%
-
2
515..537
100.0%
+
17
1
0
0