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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'APCDD1'

Total of fusion sequences: 3 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_153000.4
1..40
97.2%
+
18
CYP17A1-AS1
ENST00000647664
41..75
98.6%
-
10
1
0
0
intron-intron
2
Homo Sapiens

NM_001282653.1
3..39
100.0%
+
11

ENST00000355285
32..193
98.8%
-
18
1
0
0
intron-exon
3
Homo Sapiens

NM_153000.4
2..216
99.6%
+
18
JMY
Q8N9B5

NM_152405.4
209..230
100.0%
-
5
1
0
0
exon-intron

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