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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'APC'

Total of fusion sequences: 13 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XR_002956469.1
2..223
100.0%
+
7

NM_001354896.1
218..549
100.0%
+
5
1
0
0
exon-exon
2
Homo Sapiens

NM_001127510.2
37..236
100.0%
-
5

NM_001127510.2
233..584
96.0%
+
5
1
0
0
intron-intron
3
Homo Sapiens

XM_005246740.1
15..201
100.0%
-
2

NM_001354896.1
189..503
99.4%
+
5
3
90
0
exon-exon
4
Homo Sapiens

XM_005246740.1
15..201
99.5%
-
2

NM_001354896.1
189..589
98.5%
+
5
3
11
0
exon-exon
5
Homo Sapiens

NM_001354896.1
1..416
100.0%
-
5

XM_005246739.2
404..477
100.0%
+
2
3
11
0
exon-exon
6
Homo Sapiens

XM_011538378.3
1..331
99.4%
-
12

NM_001127510.2
325..528
99.6%
+
5
1
0
0
exon-intron
7
Homo Sapiens

XM_011538378.3
1..331
99.0%
-
12

NM_001127510.2
325..510
100.0%
+
5
1
0
0
exon-intron
8
Homo Sapiens

NM_001354896.1
5..189
99.0%
+
5

XM_017029966.1
184..246
100.0%
-
X
1
0
0
exon-intron
9
Homo Sapiens

NM_005765.2
1..240
97.1%
-
X

NM_001354896.1
235..408
96.0%
+
5
1
0
0
exon-exon
10
Homo Sapiens

NM_001127510.2
8..495
99.8%
+
5

ENST00000371189
410..498
95.4%
-
1
1
0
0
intron-intron

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