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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'APC'

Total of fusion sequences: 13 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XR_002956469.1
2..223
100.0%
+
7

NM_001354896.1
218..549
100.0%
+
5
1
0
0
exon-exon
Homo Sapiens
NM_001127510.2
37..236
100.0%
-
5

NM_001127510.2
233..584
96.0%
+
5
1
0
0
intron-intron
Homo Sapiens
NM_001354896.1
1..416
100.0%
-
5

XM_005246739.2
404..477
100.0%
+
2
3
11
0
exon-exon
Homo Sapiens
XM_005246740.1
15..201
99.5%
-
2

NM_001354896.1
189..589
98.5%
+
5
3
11
0
exon-exon
Homo Sapiens
XM_005246740.1
15..201
100.0%
-
2

NM_001354896.1
189..503
99.4%
+
5
3
90
0
exon-exon
Homo Sapiens
NM_001354896.1
5..189
99.0%
+
5

XM_017029966.1
184..246
100.0%
-
X
1
0
0
exon-intron
Homo Sapiens
NM_005765.2
1..240
97.1%
-
X

NM_001354896.1
235..408
96.0%
+
5
1
0
0
exon-exon
Homo Sapiens
NM_001127510.2
8..495
99.8%
+
5

ENST00000371189
410..498
95.4%
-
1
1
0
0
intron-intron
Homo Sapiens
XM_011538378.3
1..331
99.4%
-
12

NM_001127510.2
325..528
99.6%
+
5
1
0
0
exon-intron
Homo Sapiens
XM_011538378.3
1..331
99.0%
-
12

NM_001127510.2
325..510
100.0%
+
5
1
0
0
exon-intron

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