Result for the search of Gene Name/NCBI ID(s): 'AMN1'

Total of fusion sequences: 4 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	BM970001 ANNOTATION OF CHIMERA FUSION GenBank ID: BM970001 FASTA Head Gene (1) Alignment: AMN1 Tail Gene (2) Alignment: IFNGR1 | OMIM: 107470 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 196394 12 - 31706309 31706329 1 1 protein-coding 3459 6 + 137197485 137198122 1 1 protein-coding 655 hg38 Updated: 2019-06-06 Owner: ChiTaRS	AMN1 E9PHB0 F5GWF7 F5H1R2 F5H286 F5H3D1 F5H7U5 Q8IY45 XM_006719054.3	1..21 100.0%	- 12	IFNGR1 A0A0S2Z3R7 A0A0S2Z3Y2 A0A2R8Y4U4 A0A2R8Y792 A0A2R8Y7R1 A0A2R8YEN6 A0A2R8YFL3 A5HJZ4 E5QBZ2 P15260 Q5TFC9 Q5TFD1 Q7Z687 XM_006715470.3	19..655 100.0%	+ 6	1 0 0	exon-exon
2 Homo Sapiens	BQ028178 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ028178 FASTA Head Gene (1) Alignment: AMN1 Tail Gene (2) Alignment: IFNGR1 | OMIM: 107470 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 196394 12 - 31706309 31706329 1 1 protein-coding 3459 6 + 137197485 137198055 1 1 protein-coding 588 hg38 Updated: 2019-04-13 Owner: ChiTaRS	AMN1 E9PHB0 F5GWF7 F5H1R2 F5H286 F5H3D1 F5H7U5 Q8IY45 XM_006719054.3	1..21 100.0%	- 12	IFNGR1 A0A0S2Z3R7 A0A0S2Z3Y2 A0A2R8Y4U4 A0A2R8Y792 A0A2R8Y7R1 A0A2R8YEN6 A0A2R8YFL3 A5HJZ4 E5QBZ2 P15260 Q5TFC9 Q5TFD1 Q7Z687 XM_006715470.3	19..588 100.0%	+ 6	1 0 0	exon-exon
3 Homo Sapiens	BG031897 ANNOTATION OF CHIMERA FUSION GenBank ID: BG031897 FASTA Head Gene (1) Alignment: AMN1 Tail Gene (2) Alignment: AL031275.1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 196394 12 - 31671146 31671909 1 1 protein-coding 4294900608 1 + 168770405 168770427 0 0 797 hg38 Updated: 2019-06-06 Owner: ChiTaRS	AMN1 E9PHB0 F5GWF7 F5H1R2 F5H286 F5H3D1 F5H7U5 Q8IY45 NR_103522.1	1..756 99.5%	- 12	AL031275.1	750..772 95.7%	+ 1	1 0 0	exon-intron
4 Homo Sapiens	DT220000 ANNOTATION OF CHIMERA FUSION GenBank ID: DT220000 FASTA Head Gene (1) Alignment: ARHGEF12 | OMIM: 604763 Tail Gene (2) Alignment: AMN1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23365 11 + 120407510 120407541 2 0 oncogene, tumor suppressor, protein-coding 196394 12 - 31671797 31672220 1 0 protein-coding 425 hg38 Updated: 2018-10-27 Owner: ChiTaRS	ARHGEF12 A0A2X0SFF5 E9PMR6 Q9NZN5	1..31 96.2%	+ 11	AMN1 E9PHB0 F5GWF7 F5H1R2 F5H286 F5H3D1 F5H7U5 Q8IY45	2..425 97.7%	- 12	1 0 0	intron-intron

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