Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ALPK2'

Total of fusion sequences: 9 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ALPK2
Q86TB3

XM_017025536.2
1..73
96.4%
-
18

XM_006722426.4
74..365
96.4%
-
18
1
0
0
intron-intron BREAKPOINTs
29099951
2
Homo Sapiens

NM_001357943.1
1..265
100.0%
+
12
ALPK2
Q86TB3

XM_017025535.2
260..279
100.0%
+
18
1
0
0
exon-intron
3
Homo Sapiens

NM_001357943.1
1..269
100.0%
+
12
ALPK2
Q86TB3

XM_017025535.2
264..285
100.0%
+
18
1
0
0
exon-intron
4
Homo Sapiens

NM_001357943.1
1..404
99.8%
+
12
ALPK2
Q86TB3

XM_017025535.2
399..419
100.0%
+
18
1
0
0
exon-intron
5
Homo Sapiens
TMED6
Q8WW62

NM_144676.3
157..226
95.4%
+
16
ALPK2
Q86TB3

XM_017025536.2
171..320
96.8%
-
18
1
0
0
intron-intron
6
Homo Sapiens
ALPK2
Q86TB3

XM_017025536.2
1..24
100.0%
+
18

NM_015080.3
20..42
95.7%
-
11
1
0
0
intron-intron
7
Homo Sapiens
ALPK2
Q86TB3

XM_017025536.2
12..31
100.0%
-
18

NM_004048.2
30..360
99.4%
-
15
1
0
0
intron-exon
8
Homo Sapiens
ALPK2
Q86TB3

NM_052947.3
22..50
96.6%
-
18

XM_017009143.1
29..662
98.9%
-
5
1
0
0
intron-exon
9
Homo Sapiens
ALPK2
Q86TB3

XM_017025536.2
27..87
95.4%
-
18
LOC100507103
XR_001746830.2
88..112
97.7%
+
9
1
0
0
intron-intron

T O P