Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'AKR1B1'

Total of fusion sequences: 15 (from 2006899 parsed EST/mRNAs. Last update 2020-01-28 15:35:44)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_005271948.4
1..86
97.7%
+
5

NM_001346142.1
81..649
95.7%
-
7
1
0
0
exon-exon
2
Homo Sapiens

XM_005250234.3
1..49
100.0%
-
7

XM_005250234.3
45..467
98.9%
+
7
0
6379
9035
exon-exon
3
Homo Sapiens

NM_001346142.1
1..50
100.0%
-
7

NM_001346142.1
49..203
99.4%
+
7
0
6379
9035
exon-exon
4
Homo Sapiens

NM_001346142.1
1..287
99.4%
-
7
LOC105371709
XR_934637.3
286..314
100.0%
+
17
1
0
0
exon-intron
5
Homo Sapiens

NM_001346142.1
1..289
100.0%
-
7
ZNF735
P0CB33

NM_001159524.1
290..324
100.0%
-
7
1
0
0
exon-intron
6
Homo Sapiens
KDM4A-AS1
NR_033827.1
1..92
100.0%
-
1

NM_001346142.1
87..391
100.0%
-
7
1
0
0
exon-intron
7
Homo Sapiens

NM_024702.2
61..156
100.0%
-
17

NM_001346142.1
148..340
95.4%
+
7
1
0
0
exon-intron
8
Homo Sapiens
LOC107986827
NR_147989.1
8..351
99.8%
-
7

XM_005250234.3
166..352
95.2%
+
7
1
0
0
intron-intron
9
Homo Sapiens

NM_001346142.1
1..273
99.0%
-
7
SMG1P3
NR_027155.2
271..302
100.0%
+
16
1
0
0
exon-intron
10
Homo Sapiens

NM_001346142.1
1..290
99.0%
-
7

XM_011536519.2
279..307
100.0%
-
14
1
0
0
exon-exon

T o p