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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'ACTA2'

Total of fusion sequences: 16 (from 1528141 parsed EST/mRNAs. Last update 2020-01-13 13:10:48)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_017318308.1
1..1703
99.4%
+
19

NM_007392.3
1704..1717
99.4%
+
19
3
4
1
exon-exon
2
Mus musculus

XM_017318308.1
1..12
98.1%
+
19

NM_007392.3
13..473
98.1%
+
19
3
100
304
exon-exon
3
Mus musculus

NM_007392.3
1..9
100.0%
-
19

XM_017318308.1
10..147
100.0%
-
19
3
4
1
exon-exon
4
Mus musculus

NM_007392.3
13..293
99.3%
+
19
Smim31
Q3V2G4

NR_033217.1
204..368
96.0%
+
8
1
0
0
exon-intron
5
Mus musculus

NM_007392.3
35..646
97.4%
-
19

NM_053089.3
639..668
100.0%
+
3
1
0
0
intron-intron
6
Mus musculus

NM_007392.3
55..468
99.6%
-
19

NM_011159.2
467..495
100.0%
-
16
1
0
0
exon-intron
7
Mus musculus

NM_007392.3
1..272
100.0%
-
19

XM_011247228.2
267..286
100.0%
+
19
1
0
0
exon-intron
8
Mus musculus

NM_007392.3
44..430
100.0%
-
19
423..460
100.0%
-
Y
1
0
0
exon-intron
9
Mus musculus

NM_007392.3
41..504
100.0%
-
19

NM_008981.3
500..522
100.0%
-
14
1
0
0
exon-intron
10
Mus musculus

NM_007392.3
23..435
99.8%
-
19

XM_006516473.1
434..465
100.0%
+
13
1
0
0
exon-intron

T o p